Showing : bsgenome forge • reset
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BSgenomeForge version 1.52.0, error in .TwoBits_export
bsgenome forge twobits_export bioconductor
6.2 years ago bioinagesh • 0
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7
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2.5k
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BSgenomeForge error in .TwoBits_export
bsgenome forge TwoBits_export
updated 8.1 years ago by 16k • written 8.1 years ago by • 0
2
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5
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2.9k
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Forge a BSgenome data package
bsgenome bsgenome forge
8.7 years ago • updated 8.3 years ago jodiera • 0
0
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3
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1.5k
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BSGenome problem with forgeBSgenomeDataPkg command
bsgenome forge
9.3 years ago pj dias ▴ 60
3
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2
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1.6k
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CRISPRseek with (rough) Draft Genome
crisprseek grna searching bsgenome forge offtarget analysis
updated 9.4 years ago by 16k • written 9.4 years ago by • 0
0
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1
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1.6k
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Error from BSgenome forge using .2bit file
BSgenome forge 2bit bsgnome forge 2bit file
updated 10.6 years ago by 16k • written 10.6 years ago by • 0
2
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1
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1.7k
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How do I create BSgenome Bos_taurus_UMD3.1?
bsgenome forge bovine
updated 10.6 years ago by 16k • written 10.6 years ago by • 0
7 results • Page 1 of 1
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Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k
Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k
That's weird. Using the example data works for me. ``` > example(read10xCounts) rd10xC> # Mocking up some 10X genomics output. rd10xC> ex…
Comment: Join BOC Sciences at Drug Discovery Chemistry by teamardigen • 0
Sounds like an exciting event for anyone passionate about small molecule innovation. The focus on discovery and optimization really drives …
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by dan.gatti • 0
I am, but perhaps I'm not understanding how it should work. > sse = DropletUtils::read10xCounts(curr_files[1], mtx.class = 'SVT_Sparse…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k
Did you use the development version as Aaron suggested? There is an argument to read the market matrix file directly into an `SVT_SparseMat…
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